This combination should achieve two main targets; high performance and resource consumption, storage capacity which consequently minimize processing time. It is calculated between each feature for all classes, as in Eq. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. Whereas the worst one was SMA algorithm. By achieving 98.7%, 98.2% and 99.6%, 99% of classification accuracy and F-Score for dataset 1 and dataset 2, respectively, the proposed approach outperforms several CNNs and all recent works on COVID-19 images. In addition, up to our knowledge, MPA has not applied to any real applications yet. Appl. Mirjalili, S., Mirjalili, S. M. & Lewis, A. Grey wolf optimizer. arXiv preprint arXiv:2003.11597 (2020). If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. My education and internships have equipped me with strong technical skills in Python, deep learning models, machine learning classification, text classification, and more. As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 Deep Learning Based Image Classification of Lungs Radiography for Detecting COVID-19 using a Deep CNN and ResNet 50 the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Eng. Abbas, A., Abdelsamea, M.M. & Gaber, M.M. Classification of covid-19 in chest x-ray images using detrac deep convolutional neural network. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. Figure5 illustrates the convergence curves for FO-MPA and other algorithms in both datasets. 78, 2091320933 (2019). Hence, the FC memory is applied during updating the prey locating in the second step of the algorithm to enhance the exploitation stage. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Slider with three articles shown per slide. Adv. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. The evaluation outcomes demonstrate that ABC enhanced precision, and also it reduced the size of the features. However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. The parameters of each algorithm are set according to the default values. With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. They used different images of lung nodules and breast to evaluate their FS methods. IEEE Signal Process. However, the proposed FO-MPA approach has an advantage in performance compared to other works. Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. In Inception, there are different sizes scales convolutions (conv. All data used in this paper is available online in the repository, [https://github.com/ieee8023/covid-chestxray-dataset], [https://stanfordmlgroup.github.io/projects/chexnet], [https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia] and [https://www.sirm.org/en/category/articles/covid-19-database/]. COVID-19 (coronavirus disease 2019) is a new viral infection disease that is widely spread worldwide. They applied the SVM classifier with and without RDFS. In Eq. They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. The conference was held virtually due to the COVID-19 pandemic. They applied the SVM classifier for new MRI images to segment brain tumors, automatically. In Proceedings of the IEEE Conference on computer vision and pattern recognition workshops, 806813 (2014). Purpose The study aimed at developing an AI . MRFGRO: a hybrid meta-heuristic feature selection method for screening COVID-19 using deep features, Detection and analysis of COVID-19 in medical images using deep learning techniques, Cov-caldas: A new COVID-19 chest X-Ray dataset from state of Caldas-Colombia, Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats, COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images, ANFIS-Net for automatic detection of COVID-19, A multi-scale gated multi-head attention depthwise separable CNN model for recognizing COVID-19, Validating deep learning inference during chest X-ray classification for COVID-19 screening, Densely attention mechanism based network for COVID-19 detection in chest X-rays, https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/, https://github.com/ieee8023/covid-chestxray-dataset, https://stanfordmlgroup.github.io/projects/chexnet, https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia, https://www.sirm.org/en/category/articles/covid-19-database/, https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing, https://doi.org/10.1016/j.irbm.2019.10.006, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, https://doi.org/10.1016/j.engappai.2020.103662, https://www.sirm.org/category/senza-categoria/covid-19/, https://doi.org/10.1016/j.future.2020.03.055, http://creativecommons.org/licenses/by/4.0/, Skin cancer detection using ensemble of machine learning and deep learning techniques, Plastic pollution induced by the COVID-19: Environmental challenges and outlook, An Inclusive Survey on Marine Predators Algorithm: Variants andApplications, A Multi-strategy Improved Outpost and Differential Evolution Mutation Marine Predators Algorithm for Global Optimization, A light-weight convolutional Neural Network Architecture for classification of COVID-19 chest X-Ray images. Toaar, M., Ergen, B. }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. The first one, dataset 1 was collected by Joseph Paul Cohen and Paul Morrison and Lan Dao42, where some COVID-19 images were collected by an Italian Cardiothoracic radiologist. 4b, FO-MPA algorithm selected successfully fewer features than other algorithms, as it selected 130 and 86 features from Dataset 1 and Dataset 2, respectively. Detecting COVID-19 at an early stage is essential to reduce the mortality risk of the patients. where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. Multimedia Tools Appl. E. B., Traina-Jr, C. & Traina, A. J. 111, 300323. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. COVID-19 image classification using deep features and fractional-order marine predators algorithm. 22, 573577 (2014). By filtering titles, abstracts, and content in the Google Scholar database, this literature review was able to find 19 related papers to answer two research questions, i.e. As Inception examines all X-ray images over and over again in each epoch during the training, these rapid ups and downs are slowly minimized in the later part of the training. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. J. Clin. Civit-Masot et al. In addition, the good results achieved by the FO-MPA against other algorithms can be seen as an advantage of FO-MPA, where a balancing between exploration and exploitation stages and escaping from local optima were achieved. In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. In some cases (as exists in this work), the dataset is limited, so it is not sufficient for building & training a CNN. The lowest accuracy was obtained by HGSO in both measures. Nature 503, 535538 (2013). One of these datasets has both clinical and image data. Covid-19 Classification Using Deep Learning in Chest X-Ray Images Abstract: Covid-19 virus, which has emerged in the Republic of China in an undetermined cause, has affected the whole world quickly. The predator uses the Weibull distribution to improve the exploration capability. Softw. With accounting the first four previous events (\(m=4\)) from the memory data with derivative order \(\delta\), the position of prey can be modified as follow; Second: Adjusting \(R_B\) random parameter based on weibull distribution. Table2 shows some samples from two datasets. All authors discussed the results and wrote the manuscript together. (2) To extract various textural features using the GLCM algorithm. Med. For the image features that led to categorization, there were varied levels of agreement in the interobserver and intraobserver components that . PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. contributed to preparing results and the final figures. Accordingly, that reflects on efficient usage of memory, and less resource consumption. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. Use the Previous and Next buttons to navigate the slides or the slide controller buttons at the end to navigate through each slide. Mirjalili, S. & Lewis, A. First: prey motion based on FC the motion of the prey of Eq. Eng. Mobilenets: Efficient convolutional neural networks for mobile vision applications. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. The proposed segmentation method is capable of dealing with the problem of diffuse lung borders in CXR images of patients with COVID-19 severe or critical. Computer Department, Damietta University, Damietta, Egypt, Electrical Engineering Department, Faculty of Engineering, Fayoum University, Fayoum, Egypt, State Key Laboratory for Information Engineering in Surveying, Mapping, and Remote Sensing, Wuhan University, Wuhan, China, Department of Applied Informatics, Vytautas Magnus University, Kaunas, Lithuania, Department of Mathematics, Faculty of Science, Zagazig University, Zagazig, Egypt, School of Computer Science and Robotics, Tomsk Polytechnic University, Tomsk, Russia, You can also search for this author in Using the best performing fine-tuned VGG-16 DTL model, tests were carried out on 470 unlabeled image dataset, which was not used in the model training and validation processes. Acharya, U. R. et al. In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. Blog, G. Automl for large scale image classification and object detection. The proposed CNN architecture for Task 2 consists of 14 weighted layers, in which there are three convolutional layers and one fully connected layer, as shown in Fig. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . The largest features were selected by SMA and SGA, respectively. The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. So, for a \(4 \times 4\) matrix, will result in \(2 \times 2\) matrix after applying max pooling. et al. Sci Rep 10, 15364 (2020). Litjens, G. et al. Covid-19 dataset. (18)(19) for the second half (predator) as represented below. CNNs are more appropriate for large datasets. Our method is able to classify pneumonia from COVID-19 and visualize an abnormal area at the same time. PubMed IRBM https://doi.org/10.1016/j.irbm.2019.10.006 (2019). HGSO was ranked second with 146 and 87 selected features from Dataset 1 and Dataset 2, respectively. (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. Sci. The classification accuracy of MPA, WOA, SCA, and SGA are almost the same. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. We have used RMSprop optimizer for weight updates, cross entropy loss function and selected learning rate as 0.0001. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. Netw. Classification Covid-19 X-Ray Images | by Falah Gatea | Medium 500 Apologies, but something went wrong on our end. They showed that analyzing image features resulted in more information that improved medical imaging. Although outbreaks of SARS and MERS had confirmed human to human transmission3, they had not the same spread speed and infection power of the new coronavirus (COVID-19). The results show that, using only 6 epochs for training, the CNNs achieved very high performance on the classification task. M.A.E. Also, they require a lot of computational resources (memory & storage) for building & training. Harikumar et al.18 proposed an FS method based on wavelets to classify normality or abnormality of different types of medical images, such as CT, MRI, ultrasound, and mammographic images. Cancer 48, 441446 (2012). Also, it has killed more than 376,000 (up to 2 June 2020) [Coronavirus disease (COVID-2019) situation reports: (https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/)]. In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). While no feature selection was applied to select best features or to reduce model complexity. Going deeper with convolutions. The main purpose of Conv. & Dai, Q. Discriminative clustering and feature selection for brain mri segmentation. Narayanan, S.J., Soundrapandiyan, R., Perumal, B. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019). Phys. Corona Virus lung infected X-Ray Images accessible by Kaggle a complete 590 images, which classified in 2 classes: typical and Covid-19. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. Med. Li, S., Chen, H., Wang, M., Heidari, A. Moreover, we design a weighted supervised loss that assigns higher weight for . Heidari, A. Harikumar, R. & Vinoth Kumar, B. Fung, G. & Stoeckel, J. Svm feature selection for classification of spect images of alzheimers disease using spatial information. 2. Objective: Lung image classification-assisted diagnosis has a large application market. Eng. 43, 635 (2020). The proposed COVID-19 X-ray classification approach starts by applying a CNN (especially, a powerful architecture called Inception which pre-trained on Imagnet dataset) to extract the discriminant features from raw images (with no pre-processing or segmentation) from the dataset that contains positive and negative COVID-19 images. It noted that all produced feature vectors by CNNs used in this paper are at least bigger by more than 300 times compared to that produced by FO-MPA in terms of the size of the featureset. 41, 923 (2019). & Cmert, Z. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). So, there might be sometimes some conflict issues regarding the features vector file types or issues related to storage capacity and file transferring. and M.A.A.A. The experimental results and comparisons with other works are presented inResults and discussion section, while they are discussed in Discussion section Finally, the conclusion is described in Conclusion section. Then, applying the FO-MPA to select the relevant features from the images. Knowl. Diagnosis of parkinsons disease with a hybrid feature selection algorithm based on a discrete artificial bee colony. (8) at \(T = 1\), the expression of Eq. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. Appl. Image Anal. For general case based on the FC definition, the Eq. So some statistical operations have been added to exclude irrelevant and noisy features, and by making it more computationally efficient and stable, they are summarized as follows: Chi-square is applied to remove the features which have a high correlation values by computing the dependence between them. is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. In Iberian Conference on Pattern Recognition and Image Analysis, 176183 (Springer, 2011). Layers are applied to extract different types of features such as edges, texture, colors, and high-lighted patterns from the images. where \(REfi_{i}\) represents the importance of feature i that were calculated from all trees, where \(normfi_{ij}\) is the normalized feature importance for feature i in tree j, also T is the total number of trees. Also, As seen in Fig. Anyone you share the following link with will be able to read this content: Sorry, a shareable link is not currently available for this article. While55 used different CNN structures. Google Scholar. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. Then the best solutions are reached which determine the optimal/relevant features that should be used to address the desired output via several performance measures. Article A. The optimum path forest (OPF) classifier was applied to classify pulmonary nodules based on CT images. Medical imaging techniques are very important for diagnosing diseases. They are distributed among people, bats, mice, birds, livestock, and other animals1,2. Kharrat, A. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. For example, Da Silva et al.30 used the genetic algorithm (GA) to develop feature selection methods for ranking the quality of medical images. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. Ozturk et al. Simonyan, K. & Zisserman, A. In the last two decades, two famous types of coronaviruses SARS-CoV and MERS-CoV had been reported in 2003 and 2012, in China, and Saudi Arabia, respectively3. After feature extraction, we applied FO-MPA to select the most significant features. Such methods might play a significant role as a computer-aided tool for image-based clinical diagnosis soon. Feature selection using flower pollination optimization to diagnose lung cancer from ct images. Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Imaging 29, 106119 (2009). The GL in the discrete-time form can be modeled as below: where T is the sampling period, and m is the length of the memory terms (memory window). For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. We build the first Classification model using VGG16 Transfer leaning framework and second model using Deep Learning Technique Convolutional Neural Network CNN to classify and diagnose the disease and we able to achieve the best accuracy in both the model. Donahue, J. et al. (4). Moreover, the \(R_B\) parameter has been changed to depend on weibull distribution as described below. Zhu, H., He, H., Xu, J., Fang, Q. Evaluate the proposed approach by performing extensive comparisons to several state-of-art feature selection algorithms, most recent CNN architectures and most recent relevant works and existing classification methods of COVID-19 images. The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. SharifRazavian, A., Azizpour, H., Sullivan, J. Decaf: A deep convolutional activation feature for generic visual recognition. \(\bigotimes\) indicates the process of element-wise multiplications. For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. J. Med. Transmission scenarios for middle east respiratory syndrome coronavirus (mers-cov) and how to tell them apart. In this subsection, the performance of the proposed COVID-19 classification approach is compared to other CNN architectures. Credit: NIAID-RML A., Fan, H. & Abd ElAziz, M. Optimization method for forecasting confirmed cases of covid-19 in china. Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). Int. & Cmert, Z. Comput. Future Gener. Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation. The focus of this study is to evaluate and examine a set of deep learning transfer learning techniques applied to chest radiograph images for the classification of COVID-19, normal (healthy), and pneumonia. arXiv preprint arXiv:1409.1556 (2014). (14)-(15) are implemented in the first half of the agents that represent the exploitation. Li et al.34 proposed a self-adaptive bat algorithm (BA) to address two problems in lung X-ray images, rebalancing, and feature selection. and pool layers, three fully connected layers, the last one performs classification. Whereas, the slowest and the insufficient convergences were reported by both SGA and WOA in Dataset 1 and by SGA in Dataset 2.